Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938865.1_cds_XP_016483596.1_74698
CDS Infomation

[gene=LOC107804258] [db_xref=GeneID:107804258] [protein=pentatricopeptide repeat-containing protein At4g16470-like] [partial=5'] [protein_id=XP_016483596.1] [location=complement(join(48566..48821,48985..49106,49401..49545,51072..51132,51247..>52063))] [gbkey=CDS]
Sequence

CAAGAGTGCATTTTCCGGCAGGCGTATAAGAAAGGGAAAAGAGTCCATTGGCAAATGATG
GTTGTCGGCTTTGTTCCAAATGAGTATCTGACTATTAAGTTGTTAATTTTGTATGCAAAA
GCAGGAGACTTGGATACCGCACACATTATATTTGATAAGTTGCAATTCAAATGCCTGGTT
TCATGGAATGCTATGATTGCAGGATACGTGCAGAAGGGTATGGAGGAAATAGGCCTGAGT
CTCTACCATAATATGAAACAAAGAGGTGTACTTCCAGATCAGTACACATTTGCATCAGTC
TTTAGAGCCTGTGCCTCTTTAGCAGTCCTGGAGCAGGGCAAGCAAGCACATGCGCTGTTG
ATTAAAAGCCAAATTAGTGGAAATATTGTAGTTAATAGTGCACTTATGGACATGTATTTC
AAGTGTAGTTGTCCATCTGATGGCTATCTTGTGTTTTGTAAGTCCTTGGAAAGGAATGTG
ATAACATGGACTGCTTTGATATCTGGGTATGGACAAAATGGAAGAATAAAAGATGTTCTG
GAATCATTTCATAGGATGATAGATGAAGGATTTAGGCCAAACCATATTACATTTCTTGCT
GTTCTTTCTGCTTGTAGCCATGGGGGTTTGGTAGATAGAGGTAAGGAGTATTTTTCATTG
ATGATGAGAGATTATGGGCTTCGACCAAGAGGAAAACACTATGCAGCTATTGTGGATCTC
CTAGGCCGTGCTGGAAGATTACAAGAGGCTCATGAGTTTGTCCAAAACTCGCGTTGCGGG
GAGCACCCAGTATTATGGGGTGCCTTACTTGGGGCTTGTTTATGGAACAACGTTGCAGAG
GTAAGGAGACTGATGAAGGACTCGGGGGTGAAAAAGGAAAGTGTGGCAATTATAAAATCG
GACAAGGATACAAGATATGGGTTGGATTCCATTGTGACACATGATGGGGACAGATTGCCA
TGCTGGCCTTTAGCTAATCTATCGTCATTCAAACAGAGATGTGGTTCTGAAGCATACAGT
AAGTTAGAGGTCATTGGCATTGACGAAGCTCAGTTTTTTGAGGATCTATATGATTTCTGC
ACAGAAGCTGCTGACCATGATGGCAAGATTGTGATAGTTGCTGGGTTGGATGGTGACTAT
CTGAGAAGAAGCTTTGGTTCAGTTCTTGACATAATACCAATTGCTGATACTGTGACCAAA
CTAACTTCCCGATGTGAACTTTGTGGTAAACGTGCTTCTTTTACCTTGAGGAAGACAGGG
GAGACGAGAACCGAGTTGATTGCAGGAGCAGACGTATATATGCCTGTGTGCCGAAAGCAC
TACGTGAGTGGACAAGTTGTCAAAGAGGCTACTAGAAGTGTTCTGGATTCTCAGAAAGTT
CAATGCAGCTCTGTTTTGTAA

Peptide Sequence

PEP ID

XP_016483596.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g16470-like, partial [Nicotiana tabacum]
Sequence

QECIFRQAYKKGKRVHWQMMVVGFVPNEYLTIKLLILYAKAGDLDTAHIIFDKLQFKCLV
SWNAMIAGYVQKGMEEIGLSLYHNMKQRGVLPDQYTFASVFRACASLAVLEQGKQAHALL
IKSQISGNIVVNSALMDMYFKCSCPSDGYLVFCKSLERNVITWTALISGYGQNGRIKDVL
ESFHRMIDEGFRPNHITFLAVLSACSHGGLVDRGKEYFSLMMRDYGLRPRGKHYAAIVDL
LGRAGRLQEAHEFVQNSRCGEHPVLWGALLGACLWNNVAEVRRLMKDSGVKKESVAIIKS
DKDTRYGLDSIVTHDGDRLPCWPLANLSSFKQRCGSEAYSKLEVIGIDEAQFFEDLYDFC
TEAADHDGKIVIVAGLDGDYLRRSFGSVLDIIPIADTVTKLTSRCELCGKRASFTLRKTG
ETRTELIAGADVYMPVCRKHYVSGQVVKEATRSVLDSQKVQCSSVL

Transcript Sequence

Gene sequence data has not been registered.